what are scientis doing to monitor and respond to new viral diseases

1. Zaitlin Thousand, Palukaitis P. Advances in Agreement Plant Viruses and Virus Diseases. Annu Rev Phytopathol. 2000; 38:117–143.

two. Lawrence CM, Menon S, Eilers BJ, Bothner B, Khayat R, Douglas T, et al. Structural and functional studies of archaeal viruses. J Biol Chem. 2009; 284:12599–12603.

three. Orlova EV. How viruses infect bacteria? EMBO J. 2009; 28:797–798.

4. Bielefeldt Ohmann H, Babiuk LA. Viral infections in domestic animals every bit models for studies of viral immunology and pathogenesis. J Gen Virol. 1986; 67:1–25.

5. Baltimore D. Expression of animal virus genomes. Bacteriol Rev. 1971; 35:235–241.

half dozen. Taylor MP, Kobiler O, Enquist LW. Alphaherpesvirus axon-to-jail cell spread involves limited virion manual. Proc Natl Acad Sci U S A. 2012; 109:17046–17051.

7. Roulston A, Marcellus RC, Branton PE. Viruses and apoptosis. Annu Rev Microbiol. 1999; 53:577–628.

eight. Jordan MC, Jordan GW, Stevens JG, Miller M. Latent herpesviruses of humans. Ann Intern Med. 1984; 100:866–880.

9. Subramanya D, Grivas PD. HPV and cervical cancer: updates on an established relationship. Postgrad Med. 2008; 120:7–13.

10. Smith AP. Respiratory virus infections and performance. Philos Trans R Soc Lond B Biol Sci. 1990; 327:519–528.

11. Rook AH. Interactions of cytomegalovirus with the human immune arrangement. Rev Infect Dis. 1988; 10:Suppl 3. S460–S467.

12. Steven NM. Epstein-Barr virus latent infection in vivo. Rev Med Virol. 1997; 7:97–106.

xiii. Berris B. Chronic viral diseases. CMAJ. 1986; 135:1260–1268.

14. Smithey MJ, Li G, Venturi V, Davenport MP, Nikolich-Žugich J. Lifelong persistent viral infection alters the naive T cell pool, impairing CD8 T cell amnesty in late life. J Immunol. 2012; 189:5356–5366.

15. Horváth One thousand, Tolvaj 1000, Dávid K. [Incidence of hepatitis B, C and D infection in chronic liver diseases]. Orv Hetil. 1992; 133:2475–2480.

16. Dunne EF, Park IU. HPV and HPV-associated diseases. Infect Dis Clin N Am. 2013; 27:765–778.

17. Cantoni D, Hamlet A, Michaelis M, Wass MN, Rossman JS. Risks Posed by Reston, the Forgotten Ebolavirus. mSphere. 2016; 1.

eighteen. Leland DS, Ginocchio CC. Part of jail cell culture for virus detection in the age of engineering. Clin Microbiol Rev. 2007; 20:49–78.

19. Bell EJ, McCartney RA, Basquill D, Chaudhuri AK. Mu-antibody capture ELISA for the rapid diagnosis of enterovirus infections in patients with aseptic meningitis. J Med Virol. 1986; 19:213–217.

twenty. Kemeny DM, Challacombe SJ. Advances in ELISA and other solid-phase immunoassays. Immunol Today. 1986; 7:67–68.

21. Cai HY, Caswell JL, Prescott JF. Nonculture molecular techniques for diagnosis of bacterial illness in animals: a diagnostic laboratory perspective. Vet Pathol. 2014; 51:341–350.

22. Espy MJ, Uhl JR, Sloan LM, Buckwalter SP, Jones MF, Vetter EA, et al. Existent-fourth dimension PCR in clinical microbiology: applications for routine laboratory testing. Clin Microbiol Rev. 2006; nineteen:165–256.

23. Xiao Twoscore, Wu H, Li YJ, Li HF, He YQ, Chen G, et al. Simultaneous detection of enterovirus seventy and coxsackievirus A24 variant by multiplex existent-time RT-PCR using an internal control. J Virol Methods. 2009; 159:23–28.

24. Cai MT, Wu YD, Wu XJ, Shang SQ. [Establishment and clinical application of a new real time PCR assay for simultaneous detection of human being herpesvirus-6A and human being herpesvirus-6B]. Zhonghua Er Ke Za Zhi. 2009; 47:527–531.

25. Detsika MG, Chandler B, Khoo SH, Winstanley C, Cane P, Dorsum DJ, et al. Detection and quantification of minority HIV isolates harbouring the D30N mutation by real-time PCR amplification. J Antimicrob Chemother. 2007; 60:881–884.

26. Stránská R, van Loon AM, Polman M, Schuurman R. Application of real-fourth dimension PCR for determination of antiviral drug susceptibility of canker simplex virus. Antimicrob Agents Chemother. 2002; 46:2943–2947.

27. Lindh One thousand, Hannoun C. Genotyping of hepatitis C virus by Taqman real-time PCR. J Clin Virol. 2005; 34:108–114.

28. Hodinka RL. Point: is the era of viral civilization over in the clinical microbiology laboratory? J Clin Microbiol. 2013; 51:two–4.

29. Hematian A, Sadeghifard N, Mohebi R, Taherikalani Thou, Nasrolahi A, Amraei M, et al. Traditional and Modern Cell Culture in Virus Diagnosis. Osong Public Health Res Perspect. 2016; 7:77–82.

30. Mengelle C, Mansuy JM, Da Silva I, Guerin JL, Izopet J. Evaluation of a polymerase chain reaction-electrospray ionization time-of-flight mass spectrometry for the detection and subtyping of influenza viruses in respiratory specimens. J Clin Virol. 2013; 57:222–226.

31. Mendelson E, Aboudy Y, Smetana Z, Tepperberg M, Grossman Z. Laboratory assessment and diagnosis of built viral infections: Rubella, cytomegalovirus (CMV), varicella-zoster virus (VZV), herpes simplex virus (HSV), parvovirus B19 and human immunodeficiency virus (HIV). Reprod Toxicol. 2006; 21:350–382.

32. Yolken RH, Leister FJ. Enzyme immunoassays for measurement of cytomegalovirus immunoglobulin M antibody. J Clin Microbiol. 1981; 14:427–432.

33. Kao HW, Ashcavai M, Redeker AG. The persistence of hepatitis A IgM antibody after acute clinical hepatitis A. Hepatology. 1984; 4:933–936.

34. Schmitz H, von Deimling U, Flehmig B. Detection of IgM antibodies to cytomegalovirus (CMV) using an enzyme-labelled antigen (ELA). J Gen Virol. 1980; l:59–68.

35. Jankowski Thousand, Gut West, Imbs D, Switalski Fifty. Study of interaction between IgG and IgM antibodies against rubella virus by the immunofluorescence method. Acta Microbiol Pol. 1979; 28:63–69.

36. Arstila P, Vuorimaa T, Kalimo G, Halonen P, Viljanen M, Granfors K, et al. A solid-phase radioimmunoassay for IgG and IgM antibodies confronting measles virus. J Gen Virol. 1977; 34:167–176.

37. Calisher CH, Fremount HN, Vesely WL, el-Kafrawi AO, Mahmud MI. Relevance of detection of immunoglobulin M antibody response in birds used for arbovirus surveillance. J Clin Microbiol. 1986; 24:770–774.

38. Schmidt SD, Mazzella MJ, Nixon RA, Mathews PM. Abeta measurement by enzyme-linked immunosorbent assay. Methods Mol Biol. 2012; 849:507–527.

39. Hornsleth A, Friis B, Andersen P, Brenøe Eastward. Detection of respiratory syncytial virus in nasopharyngeal secretions by ELISA: comparison with fluorescent antibody technique. J Med Virol. 1982; 10:273–281.

40. Gerna Thousand, Passarani North, Cattaneo Eastward, Torsellini Thousand, Percivalle E, Battaglia M, et al. Diagnosis of astute non-bacterial gastroenteritis by rotavirus detection and serology. Microbiologica. 1984; 7:29–39.

41. Sundqvist VA, Wahren B. Development of sensitive and enzyme-linked immunoassays for herpesvirus antigens and some applications. Dev Biol Stand. 1982; 52:245–253.

42. Iancu LS, Macovei O, Tourle C, Beadsworth A, Duca K. [The prevalence of anti-hepatitis C virus antibodies in children from social assistance units in the county of Iasi]. Rev Med Chir Soc Med Nat Iasi. 1996; 100:109–113.

43. Businesswoman EJ, Miller JM, Weinstein MP, Richter SS, Gilligan PH, Thomson RB Jr, et al. , et al. A guide to utilization of the microbiology laboratory for diagnosis of infectious diseases: 2013 recommendations past the Infectious Diseases Lodge of America (IDSA) and the American Society for Microbiology (ASM)(a). Clin Infect Dis. 2013; 57:e22–e121.

44. van Tongeren SP, Degener JE, Harmsen HJ. Comparing of three rapid and easy bacterial DNA extraction methods for utilise with quantitative real-time PCR. Eur J Clin Microbiol Infect Dis. 2011; 30:1053–1061.

45. Sun Y, Zhao L, Zhao One thousand, Zhu R, Deng J, Wang F, et al. Four DNA extraction methods used in loop-mediated isothermal amplification for rapid adenovirus detection. J Virol Methods. 2014; 204:49–52.

46. Poste G. Molecular diagnostics: a powerful new component of the healthcare value chain. Practiced Rev Mol Diagn. 2001; 1:1–5.

47. Valle L, Amicizia D, Bacilieri S, Banfi F, Riente R, Durando P, et al. Functioning testing of two new 1-step existent time PCR assays for detection of man influenza and avian influenza viruses isolated in humans and respiratory syncytial virus. J Prev Med Hyg. 2006; 47:127–133.

48. Monne I, Ormelli Due south, Salviato A, De Battisti C, Bettini F, Salomoni A, et al. Development and validation of a ane-step realtime PCR assay for simultaneous detection of subtype H5, H7, and H9 avian influenza viruses. J Clin Microbiol. 2008; 46:1769–1773.

49. Holland PM, Abramson RD, Watson R, Gelfand DH. Detection of specific polymerase chain reaction product by utilizing the 5′----3′ exonuclease activity of Thermus aquaticus Deoxyribonucleic acid polymerase. Proc Natl Acad Sci U S A. 1991; 88:7276–7280.

50. Tyagi S, Kramer FR. Molecular beacons: probes that fluoresce upon hybridization. Nat Biotechnol. 1996; 14:303–308.

51. Tomaso H, Scholz HC, Neubauer H, Al Dahouk South, Seibold E, Landt O, et al. Real-time PCR using hybridization probes for the rapid and specific identification of Francisella tularensis subspecies tularensis. Mol Cell Probes. 2007; 21:12–16.

52. Paulasova P, Pellestor F. The peptide nucleic acids (PNAs): a new generation of probes for genetic and cytogenetic analyses. Ann Genet. 2004; 47:349–358.

53. Kaur H, Arora A, Wengel J, Maiti Southward. Thermodynamic, counterion, and hydration furnishings for the incorporation of locked nucleic acrid nucleotides into Dna duplexes. Biochemistry. 2006; 45:7347–7355.

54. Owczarzy R, You Y, Groth CL, Tataurov AV. Stability and mismatch bigotry of locked nucleic acid-Deoxyribonucleic acid duplexes. Biochemistry. 2011; 50:9352–9367.

55. Bustin SA. Accented quantification of mRNA using real-time opposite transcription polymerase chain reaction assays. J Mol Endocrinol. 2000; 25:169–193.

56. Stadhouders R, Pas SD, Anber J, Voermans J, Mes TH, Schutten Chiliad. The effect of primer-template mismatches on the detection and quantification of nucleic acids using the 5′ nuclease assay. J Mol Diagn. 2010; 12:109–117.

57. Jothikumar N, Cromeans TL, Sobsey Medico, Robertson BH. Development and evaluation of a broadly reactive TaqMan assay for rapid detection of hepatitis A virus. Appl Environ Microbiol. 2005; 71:3359–3363.

58. Ririe KM, Rasmussen RP, Wittwer CT. Production differentiation by assay of Dna melting curves during the polymerase chain reaction. Anal Biochem. 1997; 245:154–160.

59. Reiter Grand, Pfaffl MW. Effects of Plate Position, Plate Type and Sealing Systems on Real-Time PCR Results. Biotechnol Biotechnol Equip. 2008; 22:824–828.

60. Kralik P, Ricchi M. A Basic Guide to Real Time PCR in Microbial Diagnostics: Definitions, Parameters, and Everything. Forepart Microbiol. 2017; eight:108.

61. Hong YJ, Lim MS, Hwang SM, Kim TS, Park KU, Song J, et al. Detection of herpes simplex and varicella-zoster virus in clinical specimens by multiplex real-fourth dimension PCR and melting curve assay. Biomed Res Int. 2014; 2014:261947.

62. Pang Z, Li A, Li J, Qu J, He C, Zhang S, et al. Comprehensive multiplex one-footstep real-time TaqMan qRT-PCR assays for detection and quantification of hemorrhagic fever viruses. PLoS I. 2014; 9:e95635.

63. Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, Kubista K, et al. The MIQE guidelines: minimum information for publication of quantitative existent-time PCR experiments. Clin Chem. 2009; 55:611–622.

64. Schmittgen TD, Livak KJ. Analyzing real-time PCR data by the comparative C(T) method. Nat Protoc. 2008; iii:1101–1108.

65. Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J. qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR information. Genome Biol. 2007; 8:R19.

66. Procop GW. Molecular diagnostics for the detection and characterization of microbial pathogens. Clin Infect Dis. 2007; 45:Suppl 2. S99–S111.

67. Cockerill FR 3rd. Genetic methods for assessing antimicrobial resistance. Antimicrob Agents Chemother. 1999; 43:199–212.

68. Versalovic J, Lupski JR. Molecular detection and genotyping of pathogens: more authentic and rapid answers. Trends Microbiol. 2002; 10:S15–S21.

69. Hecht FM, Grant RM, Petropoulos CJ, Dillon B, Chesney MA, Tian H, et al. Sexual manual of an HIV-one variant resistant to multiple contrary-transcriptase and protease inhibitors. Northward Engl J Med. 1998; 339:307–311.

70. Hue-Roye K, Vege S. Principles of PCR-based assays. Immunohematology. 2008; 24:170–175.

71. Saiki RK, Scharf Due south, Faloona F, Mullis KB, Horn GT, Erlich HA, et al. Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle jail cell anemia. Scientific discipline. 1985; 230:1350–1354.

72. Shin SY, Ki CS, Kim HJ, Kim JW, Kim SH, Lee ST. Mutant Enrichment with 3′-Modified Oligonucleotides (MEMO)-Quantitative PCR for Detection of NPM1 Mutations in Acute Myeloid Leukemia. J Clin Lab Anal. 2015; 29:361–365.

73. Carr Air conditioning, Moore SD. Robust quantification of polymerase concatenation reactions using global fitting. PLoS One. 2012; seven:e37640.

74. Gulliksen A, Solli L, Karlsen F, Rogne H, Hovig E, Nordstrøm T, et al. Real-time nucleic acid sequence-based distension in nanoliter volumes. Anal Chem. 2004; 76:ix–14.

75. Hoffmann B, Beer M, Reid SM, Mertens P, Oura CA, van Rijn PA, et al. A review of RT-PCR technologies used in veterinary virology and illness control: sensitive and specific diagnosis of five livestock diseases notifiable to the Earth Organisation for Animal Health. Vet Microbiol. 2009; 139:1–23.

76. Yang Southward, Rothman RE. PCR-based diagnostics for infectious diseases: uses, limitations, and future applications in astute-care settings. Lancet Infect Dis. 2004; 4:337–348.

77. Kubista M, Andrade JM, Bengtsson 1000, Forootan A, Jonák J, Lind K, et al. The real-time polymerase concatenation reaction. Mol Aspects Med. 2006; 27:95–125.

78. Mirmajlessi SM, Loit E, Mänd M. General Principles of Real-Time PCR: A Technology for Quantitative Detection of Phytopathogens. J Med Bioeng. 2016; 5:49–52.

79. Damond F, Benard A, Ruelle J, Alabi A, Kupfer B, Gomes P, et al. Quality control cess of human immunodeficiency virus type 2 (HIV-2) viral load quantification assays: results from an international collaboration on HIV-2 infection in 2006. J Clin Microbiol. 2008; 46:2088–2091.

80. Broeders South, Huber I, Grohmann L, Berben Grand, Taverniers I, Mazzara Chiliad, et al. Guidelines for validation of qualitative existent-time PCR methods. Trends Food Sci Technol. 2014; 37:115–126.

rodrigueswastures1945.blogspot.com

Source: https://synapse.koreamed.org/articles/1034277

Share this post